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This means that for samples analyzed using wgMLST in BioNumerics, allelic profiles can be retrieved for e.g.

Wherever possible, subschemas from the wgMLST schemas on the BIONUMERICS Cloud Calculation Engine are now synchronized with public nomenclature.

New functionality in version 7.6.3: wgMLST and the WGS tools plugin:

The Chinese language pack is updated and now includes WGS functionality.

The import from MS Excel now handles sheet names that end with a space.

Fixed import of single-column text files.

Improved export of sequences in FASTA format from the Comparison window.

The SNP calling plugin now imports SNP data files generated by Douglas Scientific IntelliQube format and has an improved logic for marking SNP calls as manual or automatic.

one of the classical MLST loci) if the allele sequence is full-length.

The WGS tools plugin now only submits a new allele for a non-CDS locus (e.g.Import templates created by specialized plugins, such as the Antibiotics susceptibility, Riboprinter, Import Fingerprint tools and WGS tools plugin can now be managed and shared.Fixed issue with import of TIFF files via the data exchange tools.This greatly facilitates the import of VITEK MS mass spectrometry data. Improved import of mzml files, containing raw spectra or spectrum peak tables.Restored functionality of the Geographical mapping plugin by specifying additional parameters when loading the Google Maps API.Fixed import issues with whole-genome sequences from EBI and NCBI online repositories.Improvements in version 7.6.3 build 9.34990: The improvement is available in all BioNumerics version 7.6.3 builds. This avoids timeout issues with larger subschemas such as cgMLST schemas. A larger number of pie charts and bar graphs can be shown on a geographical map.Īn additional improvement worth mentioning is that, since our recent Calculation Engine maintenance, the synchronization with public wgMLST nomenclature is sped up considerably.The Chinese language pack is updated with missing translations.The Antibiotics resistance plugin now correctly deals with manually deleted decision networks.When a SNP analysis is performed, the command File > Export > Export sequences (fasta) in the Comparison window exports again the SNP set instead of the complete sequence.The BLAST executables that are shipped with BioNumerics are updated.Additional columns (E-value and Summed alignment length) are displayed in the Hit view panel of the BLAST window.A long-standing issue with the import routine from BaseSpace, in which sequence reads sets were sporadically duplicated or omitted, is fixed.In addition to Amazon S3 and BaseSpace, sequence read sets can now also be imported from Alibaba Cloud Object Storage Service (OSS).

Improvements in version 7.6.3 build 8.35510: